Glow
v1.1.2
Introduction to Glow
Getting Started
GWAS Tutorial
Benchmarks
Variant Data Manipulation
Tertiary Analysis
Troubleshooting
Contributing
Blog Posts
Additional Resources
Python API
Glow
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Index
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Index
A
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B
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C
|
D
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E
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F
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G
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H
|
L
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M
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N
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R
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S
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T
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V
A
add_struct_fields() (in module glow)
array_summary_stats() (in module glow)
array_to_dense_vector() (in module glow)
array_to_sparse_vector() (in module glow)
B
block_variants_and_samples() (in module glow.wgr)
C
call_summary_stats() (in module glow)
D
dp_summary_stats() (in module glow)
E
estimate_loco_offsets() (in module glow.wgr)
expand_struct() (in module glow)
explode_matrix() (in module glow)
F
fit() (glow.wgr.LogisticRidgeRegression method)
(glow.wgr.RidgeReduction method)
(glow.wgr.RidgeRegression method)
fit_transform() (glow.wgr.LogisticRidgeRegression method)
(glow.wgr.RidgeReduction method)
(glow.wgr.RidgeRegression method)
fit_transform_loco() (glow.wgr.LogisticRidgeRegression method)
(glow.wgr.RidgeRegression method)
from_matrix_table() (in module glow.hail)
from_ridge_reduction() (glow.wgr.LogisticRidgeRegression class method)
(glow.wgr.RidgeRegression class method)
G
genotype_states() (in module glow)
get_sample_ids() (in module glow.wgr)
glow
module
glow.gwas
module
glow.hail
module
glow.wgr
module
gq_summary_stats() (in module glow)
H
hard_calls() (in module glow)
hardy_weinberg() (in module glow)
L
lift_over_coordinates() (in module glow)
linear_regression() (in module glow.gwas)
linear_regression_gwas() (in module glow)
logistic_regression() (in module glow.gwas)
logistic_regression_gwas() (in module glow)
LogisticRidgeRegression (class in glow.wgr)
M
mean_substitute() (in module glow)
module
glow
glow.gwas
glow.hail
glow.wgr
N
normalize_variant() (in module glow)
R
reduce_block_matrix() (glow.wgr.LogisticRidgeRegression method)
register() (in module glow)
reshape_for_gwas() (in module glow.wgr)
RidgeReduction (class in glow.wgr)
RidgeRegression (class in glow.wgr)
S
sample_call_summary_stats() (in module glow)
sample_dp_summary_stats() (in module glow)
sample_gq_summary_stats() (in module glow)
subset_struct() (in module glow)
T
transform() (glow.wgr.LogisticRidgeRegression method)
(glow.wgr.RidgeReduction method)
(glow.wgr.RidgeRegression method)
(in module glow)
transform_loco() (glow.wgr.LogisticRidgeRegression method)
(glow.wgr.RidgeRegression method)
V
vector_to_array() (in module glow)
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